STRINGSTRING
rhoae protein (Danio rerio) - STRING interaction network
"rhoae" - Ras homolog gene family, member Ae in Danio rerio
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhoaeRas homolog gene family, member Ae; Belongs to the small GTPase superfamily. Rho family (193 aa)    
Predicted Functional Partners:
arhgap35a
Rho GTPase activating protein 35a (1536 aa)
       
  0.984
arhgdia
Rho GDP dissociation inhibitor (GDI) alpha (203 aa)
     
  0.981
arhgef11
Rho guanine nucleotide exchange factor (GEF) 11 (1406 aa)
     
  0.979
arhgap5
Rho GTPase activating protein 5 (1503 aa)
       
  0.973
arhgap1
Rho GTPase activating protein 1 (434 aa)
     
  0.971
arhgdig
Rho GDP dissociation inhibitor (GDI) gamma (204 aa)
     
  0.971
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12b (1336 aa)
     
  0.971
arhgef12a
Rho guanine nucleotide exchange factor (GEF) 12 (1357 aa)
     
  0.971
pkn3
Protein kinase N3 (940 aa)
     
  0.968
arhgap35
Rho GTPase activating protein 35b (1530 aa)
       
  0.967
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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