STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpar6aLysophosphatidic acid receptor 6a; Belongs to the G-protein coupled receptor 1 family. (357 aa)    
Predicted Functional Partners:
ccl38.6
C-C motif chemokine.
    
 
 0.725
trim35-23
Tripartite motif-containing 35-23.
      
 0.719
trim35-25
Tripartite motif-containing 35-25.
      
 0.719
gna13b
Guanine nucleotide-binding protein (G protein), alpha 13b.
    
 
 0.686
trim35-24
Tripartite motif-containing 35-24.
      
 0.665
ifit8
Interferon-induced protein with tetratricopeptide repeats 8.
      
 0.598
cers2b
Ceramide synthase 2b.
   
  
 0.574
TCIM
Transcriptional and immune response regulator.
      
 0.568
plxdc2
Plexin domain-containing 2.
      
 0.562
gnaq
Guanine nucleotide-binding protein (G protein), q polypeptide.
    
 0.554
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.