STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gk5Putative glycerol kinase 5; Belongs to the FGGY kinase family. (529 aa)    
Predicted Functional Partners:
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
 0.974
gpd1a
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 0.916
gpd1c
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 0.916
aqp9b
Aquaporin 9b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.874
aqp7
Aquaporin 7; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.849
gpd1b
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 0.846
pgp
Phosphoglycolate phosphatase; Belongs to the HAD-like hydrolase superfamily.
  
  
 0.822
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 
 0.696
psmd3
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 3.
   
 
 0.681
psmd12
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12.
   
 
 0.676
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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