STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrs2Magnesium transporter. (422 aa)    
Predicted Functional Partners:
trpm6
Transient receptor potential cation channel, subfamily M, member 6.
      
 0.817
magt1
Magnesium transporter protein 1; Cell surface magnesium transporter.
      
 0.807
ptger2b
Prostaglandin E receptor 2b (subtype EP2).
      
 0.742
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
      
 0.709
slc25a37
Mitoferrin-1; Mitochondrial iron transporter that specifically mediates iron uptake in developing erythroid cells, thereby playing an essential role in heme biosynthesis. The iron delivered into the mitochondria, presumably as Fe(2+), is then probably delivered to ferrochelatase to catalyze Fe(2+) incorporation into protoprophyrin IX to make heme.
    
 
 0.693
cnnm3
Uncharacterized protein.
      
 0.672
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
      
 0.661
arhgef39
Rho guanine nucleotide exchange factor (GEF) 39.
      
 0.566
ptgir
Prostaglandin I2 receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.560
mmgt1
Membrane magnesium transporter 1; Mediates Mg(2+) transport.
   
  
 0.558
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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