Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apc | rps27a | ENSDARP00000139275 | ENSDARP00000128775 | APC regulator of WNT-signaling pathway. | Ribosomal protein S27a. | 0.504 |
| apc | zranb1b | ENSDARP00000139275 | ENSDARP00000086546 | APC regulator of WNT-signaling pathway. | Ubiquitin thioesterase zranb1-B; Specifically hydrolyzes 'Lys-29'-linked and 'Lys-33'-linked diubiquitin. Also cleaves 'Lys-63'-linked chains, but with 40-fold less efficiency compared to 'Lys-29'-linked ones. Positive regulator of the Wnt signaling pathway that deubiquitinates APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration (By similarity). | 0.910 |
| inhbab | lemd3 | ENSDARP00000154098 | ENSDARP00000005474 | Inhibin subunit beta Ab. | LEM domain-containing 3. | 0.696 |
| inhbab | zranb1b | ENSDARP00000154098 | ENSDARP00000086546 | Inhibin subunit beta Ab. | Ubiquitin thioesterase zranb1-B; Specifically hydrolyzes 'Lys-29'-linked and 'Lys-33'-linked diubiquitin. Also cleaves 'Lys-63'-linked chains, but with 40-fold less efficiency compared to 'Lys-29'-linked ones. Positive regulator of the Wnt signaling pathway that deubiquitinates APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration (By similarity). | 0.722 |
| lemd3 | inhbab | ENSDARP00000005474 | ENSDARP00000154098 | LEM domain-containing 3. | Inhibin subunit beta Ab. | 0.696 |
| lemd3 | zranb1b | ENSDARP00000005474 | ENSDARP00000086546 | LEM domain-containing 3. | Ubiquitin thioesterase zranb1-B; Specifically hydrolyzes 'Lys-29'-linked and 'Lys-33'-linked diubiquitin. Also cleaves 'Lys-63'-linked chains, but with 40-fold less efficiency compared to 'Lys-29'-linked ones. Positive regulator of the Wnt signaling pathway that deubiquitinates APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration (By similarity). | 0.770 |
| mysm1 | otud4 | ENSDARP00000107103 | ENSDARP00000098303 | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | OTU deubiquitinase 4. | 0.551 |
| mysm1 | rps27a | ENSDARP00000107103 | ENSDARP00000128775 | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | Ribosomal protein S27a. | 0.761 |
| mysm1 | ubxn7 | ENSDARP00000107103 | ENSDARP00000012036 | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | UBX domain protein 7. | 0.417 |
| mysm1 | usp5 | ENSDARP00000107103 | ENSDARP00000124239 | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | Ubiquitin carboxyl-terminal hydrolase. | 0.815 |
| mysm1 | vcpip1 | ENSDARP00000107103 | ENSDARP00000078952 | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | Valosin-containing protein (p97)/p47 complex-interacting protein 1. | 0.597 |
| mysm1 | zranb1b | ENSDARP00000107103 | ENSDARP00000086546 | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | Ubiquitin thioesterase zranb1-B; Specifically hydrolyzes 'Lys-29'-linked and 'Lys-33'-linked diubiquitin. Also cleaves 'Lys-63'-linked chains, but with 40-fold less efficiency compared to 'Lys-29'-linked ones. Positive regulator of the Wnt signaling pathway that deubiquitinates APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration (By similarity). | 0.733 |
| otud4 | mysm1 | ENSDARP00000098303 | ENSDARP00000107103 | OTU deubiquitinase 4. | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | 0.551 |
| otud4 | usp5 | ENSDARP00000098303 | ENSDARP00000124239 | OTU deubiquitinase 4. | Ubiquitin carboxyl-terminal hydrolase. | 0.479 |
| otud4 | vcpip1 | ENSDARP00000098303 | ENSDARP00000078952 | OTU deubiquitinase 4. | Valosin-containing protein (p97)/p47 complex-interacting protein 1. | 0.758 |
| otud4 | zranb1b | ENSDARP00000098303 | ENSDARP00000086546 | OTU deubiquitinase 4. | Ubiquitin thioesterase zranb1-B; Specifically hydrolyzes 'Lys-29'-linked and 'Lys-33'-linked diubiquitin. Also cleaves 'Lys-63'-linked chains, but with 40-fold less efficiency compared to 'Lys-29'-linked ones. Positive regulator of the Wnt signaling pathway that deubiquitinates APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration (By similarity). | 0.731 |
| rps27a | apc | ENSDARP00000128775 | ENSDARP00000139275 | Ribosomal protein S27a. | APC regulator of WNT-signaling pathway. | 0.504 |
| rps27a | mysm1 | ENSDARP00000128775 | ENSDARP00000107103 | Ribosomal protein S27a. | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). | 0.761 |
| rps27a | traf6 | ENSDARP00000128775 | ENSDARP00000036715 | Ribosomal protein S27a. | TNF receptor-associated factor 6; E3 ubiquitin-protein ligase that mediates ubiquitination of proteins. Adapter protein that seems to play a role in signal transduction. | 0.986 |
| rps27a | ubxn7 | ENSDARP00000128775 | ENSDARP00000012036 | Ribosomal protein S27a. | UBX domain protein 7. | 0.791 |
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