Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RANBP2 | ftr52p | ENSDARP00000153036 | ENSDARP00000126374 | Si:ch1073-55a19.2. | FinTRIM family, member 52, pseudogene. | 0.483 |
RANBP2 | nmd3 | ENSDARP00000153036 | ENSDARP00000012858 | Si:ch1073-55a19.2. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.467 |
RANBP2 | nup214 | ENSDARP00000153036 | ENSDARP00000102382 | Si:ch1073-55a19.2. | Nucleoporin 214. | 0.998 |
RANBP2 | nup42 | ENSDARP00000153036 | ENSDARP00000050124 | Si:ch1073-55a19.2. | Nucleoporin NUP42; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. | 0.852 |
RANBP2 | nup88 | ENSDARP00000153036 | ENSDARP00000025718 | Si:ch1073-55a19.2. | Nucleoporin 88; Component of the nuclear pore complex. | 0.992 |
RANBP2 | ran | ENSDARP00000153036 | ENSDARP00000108629 | Si:ch1073-55a19.2. | GTP-binding nuclear protein Ran; GTPase involved in nucleocytoplasmic transport, participating both to the import and the export from the nucleus of proteins and RNAs. Switches between a cytoplasmic GDP- and a nuclear GTP-bound state by nucleotide exchange and GTP hydrolysis. Nuclear import receptors such as importin beta bind their substrates only in the absence of GTP- bound RAN and release them upon direct interaction with GTP-bound RAN, while export receptors behave in the opposite way. Thereby, RAN controls cargo loading and release by transport receptors in the proper compartment [...] | 0.963 |
RANBP2 | snupn | ENSDARP00000153036 | ENSDARP00000016305 | Si:ch1073-55a19.2. | Snurportin-1; Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. Belongs to the snurportin family. | 0.511 |
RANBP2 | xpo1a | ENSDARP00000153036 | ENSDARP00000102922 | Si:ch1073-55a19.2. | Exportin 1 (CRM1 homolog, yeast) a. | 0.920 |
RANBP2 | xpo1b | ENSDARP00000153036 | ENSDARP00000149441 | Si:ch1073-55a19.2. | Exportin 1 (CRM1 homolog, yeast) b. | 0.920 |
ftr52p | RANBP2 | ENSDARP00000126374 | ENSDARP00000153036 | FinTRIM family, member 52, pseudogene. | Si:ch1073-55a19.2. | 0.483 |
ftr52p | nmd3 | ENSDARP00000126374 | ENSDARP00000012858 | FinTRIM family, member 52, pseudogene. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.467 |
ftr52p | nup214 | ENSDARP00000126374 | ENSDARP00000102382 | FinTRIM family, member 52, pseudogene. | Nucleoporin 214. | 0.996 |
ftr52p | nup88 | ENSDARP00000126374 | ENSDARP00000025718 | FinTRIM family, member 52, pseudogene. | Nucleoporin 88; Component of the nuclear pore complex. | 0.948 |
ftr52p | ran | ENSDARP00000126374 | ENSDARP00000108629 | FinTRIM family, member 52, pseudogene. | GTP-binding nuclear protein Ran; GTPase involved in nucleocytoplasmic transport, participating both to the import and the export from the nucleus of proteins and RNAs. Switches between a cytoplasmic GDP- and a nuclear GTP-bound state by nucleotide exchange and GTP hydrolysis. Nuclear import receptors such as importin beta bind their substrates only in the absence of GTP- bound RAN and release them upon direct interaction with GTP-bound RAN, while export receptors behave in the opposite way. Thereby, RAN controls cargo loading and release by transport receptors in the proper compartment [...] | 0.940 |
ftr52p | xpo1a | ENSDARP00000126374 | ENSDARP00000102922 | FinTRIM family, member 52, pseudogene. | Exportin 1 (CRM1 homolog, yeast) a. | 0.907 |
ftr52p | xpo1b | ENSDARP00000126374 | ENSDARP00000149441 | FinTRIM family, member 52, pseudogene. | Exportin 1 (CRM1 homolog, yeast) b. | 0.907 |
nmd3 | RANBP2 | ENSDARP00000012858 | ENSDARP00000153036 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Si:ch1073-55a19.2. | 0.467 |
nmd3 | ftr52p | ENSDARP00000012858 | ENSDARP00000126374 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | FinTRIM family, member 52, pseudogene. | 0.467 |
nmd3 | phax | ENSDARP00000012858 | ENSDARP00000065035 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Phosphorylated adaptor for RNA export. | 0.477 |
nmd3 | ran | ENSDARP00000012858 | ENSDARP00000108629 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | GTP-binding nuclear protein Ran; GTPase involved in nucleocytoplasmic transport, participating both to the import and the export from the nucleus of proteins and RNAs. Switches between a cytoplasmic GDP- and a nuclear GTP-bound state by nucleotide exchange and GTP hydrolysis. Nuclear import receptors such as importin beta bind their substrates only in the absence of GTP- bound RAN and release them upon direct interaction with GTP-bound RAN, while export receptors behave in the opposite way. Thereby, RAN controls cargo loading and release by transport receptors in the proper compartment [...] | 0.906 |
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