Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E9QJB8_DANRE | valopa | ENSDARP00000120672 | ENSDARP00000088502 | Si:ch211-274p24.2. | Vertebrate ancient long opsin a. | 0.437 |
LOC568375 | valopa | ENSDARP00000153845 | ENSDARP00000088502 | Pre-miRNA 5'-monophosphate methyltransferase; O-methyltransferase that specifically dimethylates the 5' monophosphate of pre-miRNAs, acting as a negative regulator of miRNA processing. The 5' monophosphate of pre-miRNAs is recognized by dicer1 and is required for pre-miRNAs processing: methylation at this position reduces the processing of pre-miRNAs by dicer1 (By similarity). | Vertebrate ancient long opsin a. | 0.475 |
XPO5 | valopa | ENSDARP00000136252 | ENSDARP00000088502 | Si:ch211-233m11.2. | Vertebrate ancient long opsin a. | 0.540 |
cry1a | valopa | ENSDARP00000112452 | ENSDARP00000088502 | Cryptochrome circadian regulator 1a. | Vertebrate ancient long opsin a. | 0.451 |
mafba | valopa | ENSDARP00000018087 | ENSDARP00000088502 | Transcription factor MafB; May act as a transcriptional activator or repressor. Involved in neurogenesis. Involved in the development of rhombomeres (r) 5 and 6 segments from their common precursor 'proto-segment' in the hindbrain. Belongs to the bZIP family. Maf subfamily. | Vertebrate ancient long opsin a. | 0.588 |
parietopsin-2 | valopa | ENSDARP00000130793 | ENSDARP00000088502 | Parietopsin. | Vertebrate ancient long opsin a. | 0.865 |
valopa | E9QJB8_DANRE | ENSDARP00000088502 | ENSDARP00000120672 | Vertebrate ancient long opsin a. | Si:ch211-274p24.2. | 0.437 |
valopa | LOC568375 | ENSDARP00000088502 | ENSDARP00000153845 | Vertebrate ancient long opsin a. | Pre-miRNA 5'-monophosphate methyltransferase; O-methyltransferase that specifically dimethylates the 5' monophosphate of pre-miRNAs, acting as a negative regulator of miRNA processing. The 5' monophosphate of pre-miRNAs is recognized by dicer1 and is required for pre-miRNAs processing: methylation at this position reduces the processing of pre-miRNAs by dicer1 (By similarity). | 0.475 |
valopa | XPO5 | ENSDARP00000088502 | ENSDARP00000136252 | Vertebrate ancient long opsin a. | Si:ch211-233m11.2. | 0.540 |
valopa | cry1a | ENSDARP00000088502 | ENSDARP00000112452 | Vertebrate ancient long opsin a. | Cryptochrome circadian regulator 1a. | 0.451 |
valopa | mafba | ENSDARP00000088502 | ENSDARP00000018087 | Vertebrate ancient long opsin a. | Transcription factor MafB; May act as a transcriptional activator or repressor. Involved in neurogenesis. Involved in the development of rhombomeres (r) 5 and 6 segments from their common precursor 'proto-segment' in the hindbrain. Belongs to the bZIP family. Maf subfamily. | 0.588 |
valopa | parietopsin-2 | ENSDARP00000088502 | ENSDARP00000130793 | Vertebrate ancient long opsin a. | Parietopsin. | 0.865 |