STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arrdc1aArrestin domain-containing 1a. (445 aa)    
Predicted Functional Partners:
rftn2
Raftlin family member 2.
   
  
 0.902
clic3
Chloride intracellular channel 3.
   
  
 0.840
mospd2
Motile sperm domain-containing 2.
      
 0.834
OTOP1
Otopetrin 1.
      
 0.807
camsap2a
Calmodulin-regulated spectrin-associated protein family, member 2a.
      
 0.746
slc26a1
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
   
  
 0.729
pho
Phoenix.
      
 0.728
slc14a2
Urea transporter; Belongs to the urea transporter family.
   
  
 0.673
znf503
Zinc finger protein 503; Required for segmental gene expression during hindbrain development. May function as a transcriptional repressor. Belongs to the Elbow/Noc family.
   
  
 0.667
mtf1
Metal-regulatory transcription factor 1.
    
 
 0.648
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.