STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dbn1Drebrin 1. (553 aa)    
Predicted Functional Partners:
lrp1bb
Low density lipoprotein receptor-related protein 1Bb.
      
 0.741
rad9a
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.740
igsf21a
Immunoglobin superfamily, member 21a.
    
 
 0.731
rad9b
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.714
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.696
bbox1
Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1.
      
 0.690
cap1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 
 0.679
cap2
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 
 0.679
ERC1
Si:dkey-222l13.1.
    
 
 0.672
prr7
Proline-rich 7 (synaptic).
      
 0.667
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.