Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cdh17 | matn3b | ENSDARP00000042894 | ENSDARP00000122906 | Cadherin 17, LI cadherin (liver-intestine). | Matrilin-3b. | 0.530 |
celf2 | matn3b | ENSDARP00000122415 | ENSDARP00000122906 | CUGBP Elav-like family member 2; RNA-binding protein implicated in the regulation of several post-transcriptional events. May be involved in pre-mRNA alternative splicing, mRNA translation repression and stability (By similarity). | Matrilin-3b. | 0.562 |
celf2 | u2af2b | ENSDARP00000122415 | ENSDARP00000023679 | CUGBP Elav-like family member 2; RNA-binding protein implicated in the regulation of several post-transcriptional events. May be involved in pre-mRNA alternative splicing, mRNA translation repression and stability (By similarity). | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.450 |
comp | matn3b | ENSDARP00000130361 | ENSDARP00000122906 | Cartilage oligomeric matrix protein. | Matrilin-3b. | 0.528 |
fam20cb | matn3b | ENSDARP00000108033 | ENSDARP00000122906 | FAM20C golgi-associated secretory pathway kinase b. | Matrilin-3b. | 0.525 |
fli1b | fxyd1 | ENSDARP00000058612 | ENSDARP00000151510 | Fli-1 proto-oncogene, ETS transcription factor b. | FXYD domain-containing ion transport regulator; Belongs to the FXYD family. | 0.400 |
fli1b | matn3b | ENSDARP00000058612 | ENSDARP00000122906 | Fli-1 proto-oncogene, ETS transcription factor b. | Matrilin-3b. | 0.550 |
fli1b | npas1 | ENSDARP00000058612 | ENSDARP00000146804 | Fli-1 proto-oncogene, ETS transcription factor b. | Neuronal PAS domain protein 1. | 0.511 |
fxyd1 | fli1b | ENSDARP00000151510 | ENSDARP00000058612 | FXYD domain-containing ion transport regulator; Belongs to the FXYD family. | Fli-1 proto-oncogene, ETS transcription factor b. | 0.400 |
fxyd1 | matn3b | ENSDARP00000151510 | ENSDARP00000122906 | FXYD domain-containing ion transport regulator; Belongs to the FXYD family. | Matrilin-3b. | 0.742 |
fxyd1 | npas1 | ENSDARP00000151510 | ENSDARP00000146804 | FXYD domain-containing ion transport regulator; Belongs to the FXYD family. | Neuronal PAS domain protein 1. | 0.479 |
lum | matn3b | ENSDARP00000119600 | ENSDARP00000122906 | Lumican. | Matrilin-3b. | 0.682 |
matn3b | cdh17 | ENSDARP00000122906 | ENSDARP00000042894 | Matrilin-3b. | Cadherin 17, LI cadherin (liver-intestine). | 0.530 |
matn3b | celf2 | ENSDARP00000122906 | ENSDARP00000122415 | Matrilin-3b. | CUGBP Elav-like family member 2; RNA-binding protein implicated in the regulation of several post-transcriptional events. May be involved in pre-mRNA alternative splicing, mRNA translation repression and stability (By similarity). | 0.562 |
matn3b | comp | ENSDARP00000122906 | ENSDARP00000130361 | Matrilin-3b. | Cartilage oligomeric matrix protein. | 0.528 |
matn3b | fam20cb | ENSDARP00000122906 | ENSDARP00000108033 | Matrilin-3b. | FAM20C golgi-associated secretory pathway kinase b. | 0.525 |
matn3b | fli1b | ENSDARP00000122906 | ENSDARP00000058612 | Matrilin-3b. | Fli-1 proto-oncogene, ETS transcription factor b. | 0.550 |
matn3b | fxyd1 | ENSDARP00000122906 | ENSDARP00000151510 | Matrilin-3b. | FXYD domain-containing ion transport regulator; Belongs to the FXYD family. | 0.742 |
matn3b | lum | ENSDARP00000122906 | ENSDARP00000119600 | Matrilin-3b. | Lumican. | 0.682 |
matn3b | npas1 | ENSDARP00000122906 | ENSDARP00000146804 | Matrilin-3b. | Neuronal PAS domain protein 1. | 0.619 |
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