STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDARG00000069365Zgc:171310 (342 aa)    
Predicted Functional Partners:
gspt1l
G1 to S phase transition 1, like
   
 
 0.566
gspt1
G1 to S phase transition 1
   
 
 0.566
atxn2
Ataxin 2
   
 
 0.551
atxn2l
Ataxin 2-like
   
 
 0.551
ncl
Nucleolin
   
 
 0.516
eif4g2a
Eukaryotic translation initiation factor 4, gamma 2a
   
 
 0.516
ENSDARG00000077766
Uncharacterized protein
   
 
 0.516
paip1
poly(A) binding protein interacting protein 1
   
 
 0.516
eif4g2b
Eukaryotic translation initiation factor 4, gamma 2b
   
 
 0.516
zgc:158450
Eukaryotic translation initiation factor 4 gamma, 1
   
 
 0.516
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (9%) [HD]