STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zgc:55558Zgc:55558 protein. (187 aa)    
Predicted Functional Partners:
braf
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.953
raf1b
Raf-1 proto-oncogene, serine/threonine kinase b.
   
 0.953
raf1a
Raf-1 proto-oncogene, serine/threonine kinase a.
   
 0.953
RASSF5
Si:dkey-85p17.3.
    
 0.951
nf1b
Neurofibromin 1b.
    
 0.951
nf1a
Neurofibromin 1a.
    
 0.951
araf
A-Raf proto-oncogene, serine/threonine kinase.
   
 0.948
rasa1a
RAS p21 protein activator (GTPase-activating protein) 1a.
   
 0.943
rasa1b
RAS p21 protein activator (GTPase-activating protein) 1b.
   
 0.943
sos2
Son of sevenless homolog 2 (Drosophila).
   
 0.939
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.