STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spint2Serine peptidase inhibitor, Kunitz type, 2. (431 aa)    
Predicted Functional Partners:
tmprss13a
Transmembrane serine protease 13a; Belongs to the peptidase S1 family.
   
 
 0.896
ttc37
Tetratricopeptide repeat domain 37.
      
 0.831
pdzk1ip1
PDZK1-interacting protein 1.
   
  
 0.805
tmprss13b
Transmembrane serine protease 13b; Belongs to the peptidase S1 family.
   
 
 0.778
appb
Amyloid beta (A4) precursor protein b.
   
 
 0.752
tssk6
Testis-specific serine kinase 6; Belongs to the protein kinase superfamily.
      
 0.740
ppp1r14ab
Protein phosphatase 1, regulatory (inhibitor) subunit 14Ab.
   
  
 0.687
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
      
 0.669
galnt10
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10).
      
 0.669
GALNT10
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.666
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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