STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phf10BRG1-associated factor 45A; Involved in transcription activity regulation by chromatin remodeling in the context of the neural progenitors-specific chromatin remodeling complex (npBAF complex). May play a role in the proliferation of neural progenitors (By similarity) (490 aa)    
Predicted Functional Partners:
arid2
At-rich interactive domain-containing protein 2; AT rich interactive domain 2 (ARID, RFX-like)
   
 
 0.951
ss18
Synovial sarcoma translocation, chromosome 18 (H. sapiens)
   
 
 0.936
smarcb1a
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A; Involved in chromatin-remodeling. Core component of the BAF (SWI/SNF) complex. This ATP-dependent chromatin-remodeling complex plays important roles in cell proliferation and differentiation, in cellular antiviral activities and inhibition of tumor formation. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron- specific chromatin remodeling complex (nBAF complex) and may play a role in neural development (By similarity)
   
 0.918
actl6a
Actin-like protein 6a; Actin-like 6A; Belongs to the actin family
   
 
 0.910
smarce1
Swi/snf-related, matrix-associated, actin-dependent regulator of chromatin, subfamily e, member 1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
   
 
 0.907
smarcd1
Swi/snf-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
   
 
 0.885
agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
      
 0.885
ENSDARP00000114287
WD repeat domain 27
 
 
  
 0.872
bptf
Nucleosome-remodeling factor subunit bptf isoform x5; Bromodomain PHD finger transcription factor
   
 
 0.871
smarcb1b
Swi/snf-related, matrix-associated, actin-dependent regulator of chromatin, subfamily b, member 1b; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b
   
 
 0.863
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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