STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ociad1OCIA domain-containing protein 1. (266 aa)    
Predicted Functional Partners:
fip1l1a
FIP1-like 1a (S. cerevisiae).
      
 0.868
dcun1d4
DCN1-like protein 4.
      
 0.863
atp10d
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.860
cox18
Cytochrome c oxidase assembly factor COX18.
      
 0.806
fryl
Furry homolog,-like.
      
 0.801
fip1l1b
Pre-mRNA 3'-end-processing factor FIP1; Involved in mRNA processing; Belongs to the FIP1 family.
      
 0.745
adgrl3.1
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
      
 0.589
timmdc1
Complex I assembly factor TIMMDC1, mitochondrial; Chaperone protein involved in the assembly of the mitochondrial NADH:ubiquinone oxidoreductase complex (complex I). Participates in constructing the membrane arm of complex I (By similarity).
   
 
 0.568
arf1
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.497
rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family.
      
 0.410
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.