Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSDARP00000152484 | ENSDARP00000154399 | ENSDARP00000152484 | ENSDARP00000154399 | DDE_Tnp_1_7 domain-containing protein. | Si:dkeyp-53e4.4. | 0.999 |
ENSDARP00000152484 | sprtn | ENSDARP00000152484 | ENSDARP00000140734 | DDE_Tnp_1_7 domain-containing protein. | SprT-like N-terminal domain. | 0.877 |
ENSDARP00000152484 | tdp2b | ENSDARP00000152484 | ENSDARP00000094388 | DDE_Tnp_1_7 domain-containing protein. | Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (top2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals (By similarity). Controls gastrulation movements and left/right (L/R) axis determination via smad3-mediated regulation of cdh1/e-cadhe [...] | 0.805 |
ENSDARP00000154399 | ENSDARP00000152484 | ENSDARP00000154399 | ENSDARP00000152484 | Si:dkeyp-53e4.4. | DDE_Tnp_1_7 domain-containing protein. | 0.999 |
ENSDARP00000154399 | sprtn | ENSDARP00000154399 | ENSDARP00000140734 | Si:dkeyp-53e4.4. | SprT-like N-terminal domain. | 0.875 |
ENSDARP00000154399 | tdp2b | ENSDARP00000154399 | ENSDARP00000094388 | Si:dkeyp-53e4.4. | Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (top2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals (By similarity). Controls gastrulation movements and left/right (L/R) axis determination via smad3-mediated regulation of cdh1/e-cadhe [...] | 0.805 |
acot13 | tdp2b | ENSDARP00000117803 | ENSDARP00000094388 | Acyl-CoA thioesterase 13. | Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (top2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals (By similarity). Controls gastrulation movements and left/right (L/R) axis determination via smad3-mediated regulation of cdh1/e-cadhe [...] | 0.866 |
dctpp1 | tdp2b | ENSDARP00000070991 | ENSDARP00000094388 | dCTP pyrophosphatase 1; Hydrolyzes deoxynucleoside triphosphates (dNTPs) to the corresponding nucleoside monophosphates. Has a strong preference for dCTP and its analogs including 5-iodo-dCTP and 5-methyl-dCTP for which it may even have a higher efficiency. May protect DNA or RNA against the incorporation of these genotoxic nucleotide analogs through their catabolism. | Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (top2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals (By similarity). Controls gastrulation movements and left/right (L/R) axis determination via smad3-mediated regulation of cdh1/e-cadhe [...] | 0.690 |
ilrun | rps27a | ENSDARP00000129179 | ENSDARP00000128775 | Protein ILRUN; May have a roles as negative regulator of innate antiviral response. | Ribosomal protein S27a. | 0.541 |
ilrun | tdp2b | ENSDARP00000129179 | ENSDARP00000094388 | Protein ILRUN; May have a roles as negative regulator of innate antiviral response. | Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (top2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals (By similarity). Controls gastrulation movements and left/right (L/R) axis determination via smad3-mediated regulation of cdh1/e-cadhe [...] | 0.738 |
ilrun | uba52 | ENSDARP00000129179 | ENSDARP00000060744 | Protein ILRUN; May have a roles as negative regulator of innate antiviral response. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.547 |
rps27a | ilrun | ENSDARP00000128775 | ENSDARP00000129179 | Ribosomal protein S27a. | Protein ILRUN; May have a roles as negative regulator of innate antiviral response. | 0.541 |
rps27a | sprtn | ENSDARP00000128775 | ENSDARP00000140734 | Ribosomal protein S27a. | SprT-like N-terminal domain. | 0.558 |
rps27a | tdp2b | ENSDARP00000128775 | ENSDARP00000094388 | Ribosomal protein S27a. | Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (top2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals (By similarity). Controls gastrulation movements and left/right (L/R) axis determination via smad3-mediated regulation of cdh1/e-cadhe [...] | 0.810 |
rps27a | uba52 | ENSDARP00000128775 | ENSDARP00000060744 | Ribosomal protein S27a. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.999 |
sprtn | ENSDARP00000152484 | ENSDARP00000140734 | ENSDARP00000152484 | SprT-like N-terminal domain. | DDE_Tnp_1_7 domain-containing protein. | 0.877 |
sprtn | ENSDARP00000154399 | ENSDARP00000140734 | ENSDARP00000154399 | SprT-like N-terminal domain. | Si:dkeyp-53e4.4. | 0.875 |
sprtn | rps27a | ENSDARP00000140734 | ENSDARP00000128775 | SprT-like N-terminal domain. | Ribosomal protein S27a. | 0.558 |
sprtn | tdp1 | ENSDARP00000140734 | ENSDARP00000124976 | SprT-like N-terminal domain. | Tyrosyl-DNA phosphodiesterase 1. | 0.639 |
sprtn | tdp2b | ENSDARP00000140734 | ENSDARP00000094388 | SprT-like N-terminal domain. | Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (top2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals (By similarity). Controls gastrulation movements and left/right (L/R) axis determination via smad3-mediated regulation of cdh1/e-cadhe [...] | 0.764 |
page 1 of 2