STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trap1TNF receptor-associated protein 1. (719 aa)    
Predicted Functional Partners:
stip1
Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein).
   
 
 0.887
ptges3a
Prostaglandin E synthase 3a (cytosolic).
   
 
 0.865
hspa8b
Si:dkey-4p15.3; Belongs to the heat shock protein 70 family.
   
 
 0.789
ppp5c
Serine/threonine-protein phosphatase.
   
 
 0.784
hsph1
Heat shock 105/110 protein 1.
   
 
 0.774
ahsa1a
AHA1, activator of heat shock protein ATPase homolog 1a.
   
 
 0.766
hspd1
Heat shock 60kD protein 1 (Chaperonin); Belongs to the chaperonin (HSP60) family.
   
 
 0.765
ahsa1b
AHA1, activator of heat shock protein ATPase homolog 1b.
   
 
 0.765
hspa12b
Heat shock protein 12B.
   
 
 0.757
hspe1
Heat shock 10 protein 1 (Chaperonin 10); Belongs to the GroES chaperonin family.
   
 
 0.748
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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