STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
heatr6HEAT repeat-containing protein 6. (1201 aa)    
Predicted Functional Partners:
usp32
Ubiquitin-specific peptidase 32; Belongs to the peptidase C19 family.
      
 0.743
bcas3
BCAS3 microtubule-associated cell migration factor.
   
  
 0.692
kif1aa
Kinesin family member 1Aa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.649
relch
RAB11-binding protein RELCH homolog; May regulate intracellular cholesterol transport.
      
 0.630
ints2
Integrator complex subunit 2.
   
  
 0.625
ints4
Integrator complex subunit 4.
      
 0.602
gnl1
Guanine nucleotide-binding protein-like 1.
   
  
 0.592
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
      
 0.570
tbx2a
T-box transcription factor 2a.
      
 0.566
lztr1
Leucine-zipper-like transcription regulator 1.
      
 0.542
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.