STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eysProtein eyes shut homolog. (217 aa)    
Predicted Functional Partners:
ush2a
Usher syndrome 2A (autosomal recessive, mild).
    
 
 0.862
cerkl
Ceramide kinase-like.
      
 0.745
si:dkey-44k1.5
Si:dkey-44k1.5.
      
 0.744
fam161a
FAM161 centrosomal protein A.
    
 
 0.681
impg1b
Interphotoreceptor matrix proteoglycan 1b.
      
 0.674
TULP1
Tubby-related protein 1-like.
      
 0.669
lca5
Lebercilin LCA5.
      
 0.662
pde6c
Phosphodiesterase.
    
 
 0.662
eys-2
Protein eyes shut homolog; Required to maintain the integrity of photoreceptor cells. Specifically required for normal morphology of the photoreceptor ciliary pocket, and might thus facilitate protein trafficking between the photoreceptor inner and outer segments via the transition zone. Belongs to the EYS family.
 
    
 0.657
pde6a
Phosphodiesterase.
    
 
 0.647
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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