STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbProhibitin. (271 aa)    
Predicted Functional Partners:
phb2b
Prohibitin.
  
0.998
phb2a
Prohibitin.
  
 
0.987
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
 0.884
afg3l2
Si:ch211-12e1.4 protein.
   
 0.878
stom
Stomatin.
    
 
 0.876
stoml2
Stomatin (EPB72)-like 2.
   
 
 0.876
atp23
Mitochondrial inner membrane protease ATP23 homolog; Belongs to the peptidase M76 family.
   
 
 0.769
E7F6D6_DANRE
Si:ch1073-174d20.2.
   
 
 0.762
tufm
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.757
pmpca
Peptidase (mitochondrial-processing) alpha; Belongs to the peptidase M16 family.
  
 0.750
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.