STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr183bG-protein coupled receptor 183-B; Probable receptor for oxysterols that plays a central role during humoral immunity. Promotes activated B-cell localization in the outer follicle and interfollicular regions (By similarity). Belongs to the G-protein coupled receptor 1 family. (366 aa)    
Predicted Functional Partners:
asxl2
ASXL transcriptional regulator 2.
      
 0.644
irf7
Interferon regulatory factor 7.
      
 0.563
ephx2
Epoxide hydrolase 2, cytoplasmic.
      
 0.554
kcnn4
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
      
 0.550
chgb
Chromogranin B.
   
  
 0.476
sesn3
Sestrin 3.
      
 0.453
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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