Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
crestin | dlx2a | ENSDARP00000142925 | ENSDARP00000103004 | Crestin. | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | 0.855 |
crestin | foxd3 | ENSDARP00000142925 | ENSDARP00000107660 | Crestin. | Forkhead box D3. | 0.857 |
crestin | sox10 | ENSDARP00000142925 | ENSDARP00000100237 | Crestin. | HMG-box transcription factor Sox10. | 0.899 |
crestin | sox9a | ENSDARP00000142925 | ENSDARP00000006945 | Crestin. | HMG box transcription factor Sox9a. | 0.669 |
dlx1a | dlx2a | ENSDARP00000011033 | ENSDARP00000103004 | Homeobox protein Dlx1a. | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | 0.815 |
dlx1a | fgf8a | ENSDARP00000011033 | ENSDARP00000018653 | Homeobox protein Dlx1a. | Fibroblast growth factor 8; Plays an important role in the regulation of embryonic development, cell proliferation, cell differentiation and cell migration (By similarity). Required for Kupffer's vesicle ciliogenesis. | 0.461 |
dlx1a | gad1b | ENSDARP00000011033 | ENSDARP00000110348 | Homeobox protein Dlx1a. | Glutamate decarboxylase 1b. | 0.608 |
dlx1a | lhx6 | ENSDARP00000011033 | ENSDARP00000017657 | Homeobox protein Dlx1a. | LIM homeobox 6. | 0.766 |
dlx1a | shha | ENSDARP00000011033 | ENSDARP00000125090 | Homeobox protein Dlx1a. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.604 |
dlx1a | sox10 | ENSDARP00000011033 | ENSDARP00000100237 | Homeobox protein Dlx1a. | HMG-box transcription factor Sox10. | 0.433 |
dlx1a | sox9a | ENSDARP00000011033 | ENSDARP00000006945 | Homeobox protein Dlx1a. | HMG box transcription factor Sox9a. | 0.458 |
dlx2a | crestin | ENSDARP00000103004 | ENSDARP00000142925 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Crestin. | 0.855 |
dlx2a | dlx1a | ENSDARP00000103004 | ENSDARP00000011033 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Homeobox protein Dlx1a. | 0.815 |
dlx2a | fgf8a | ENSDARP00000103004 | ENSDARP00000018653 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Fibroblast growth factor 8; Plays an important role in the regulation of embryonic development, cell proliferation, cell differentiation and cell migration (By similarity). Required for Kupffer's vesicle ciliogenesis. | 0.731 |
dlx2a | foxd3 | ENSDARP00000103004 | ENSDARP00000107660 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Forkhead box D3. | 0.754 |
dlx2a | gad1b | ENSDARP00000103004 | ENSDARP00000110348 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Glutamate decarboxylase 1b. | 0.757 |
dlx2a | hand2 | ENSDARP00000103004 | ENSDARP00000022921 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Heart- and neural crest derivatives-expressed protein 2; Essential for myocardial and pectoral fin differentiation, patterning and morphogenesis. | 0.810 |
dlx2a | lhx6 | ENSDARP00000103004 | ENSDARP00000017657 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | LIM homeobox 6. | 0.803 |
dlx2a | shha | ENSDARP00000103004 | ENSDARP00000125090 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.784 |
dlx2a | sox10 | ENSDARP00000103004 | ENSDARP00000100237 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | HMG-box transcription factor Sox10. | 0.846 |
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