STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem72Transmembrane protein 72. (252 aa)    
Predicted Functional Partners:
zgc:103564
RAD52 motif-containing protein 1; May confer resistance to the antitumor agent cisplatin. Binds to DNA and RNA (By similarity).
      
 0.860
iqca1
IQ motif-containing with AAA domain 1.
      
 0.744
rabgef1l
RAB guanine nucleotide exchange factor (GEF) 1,-like.
      
 0.659
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
      
 0.659
npy4r
Neuropeptide Y receptor Y4; Belongs to the G-protein coupled receptor 1 family.
      
 0.562
slc19a3b
Solute carrier family 19 member 3b.
      
 0.553
daw1
Dynein assembly factor with WDR repeat domains 1; Required for axonemal dynein assembly and ciliary motility in ciliated organs, including Kupffer's vesicle, during embryogenesis.
      
 0.552
cxcl8b.1
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
      
 0.545
acad11
Acyl-CoA dehydrogenase family, member 11.
      
 0.544
rnf181
E3 ubiquitin-protein ligase RNF181; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
      
 0.506
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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