STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam110bProtein FAM110B. (397 aa)    
Predicted Functional Partners:
tmem106a
Transmembrane protein 106A.
      
 0.864
slc2a12
Solute carrier family 2, facilitated glucose transporter member 12; Insulin-regulated facilitative glucose transporter.
      
 0.806
tmem106bb
Transmembrane protein 106B; Involved in dendrite morphogenesis and maintenance by regulating lysosomal trafficking; Belongs to the TMEM106 family.
      
 0.740
slc38a5a
Solute carrier family 38 member 5a.
      
 0.644
cspp1
Centrosome and spindle pole-associated protein 1a.
      
 0.602
ankrd34c
ANK_REP_REGION domain-containing protein.
      
 0.579
msantd4
Myb/SANT-like DNA-binding domain-containing 4 with coiled-coils.
      
 0.569
aasdhppt
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
      
 0.566
ankrd49
Ankyrin repeat domain 49.
   
  
 0.564
nsmaf
Neutral sphingomyelinase (N-SMase) activation-associated factor.
      
 0.558
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.