Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GPATCH2 | bysl | ENSDARP00000136154 | ENSDARP00000001346 | Si:ch73-21k16.4. | Bystin-like. | 0.931 |
GPATCH2 | dhx15 | ENSDARP00000136154 | ENSDARP00000075688 | Si:ch73-21k16.4. | DEAH (Asp-Glu-Ala-His) box helicase 15. | 0.991 |
GPATCH2 | nom1 | ENSDARP00000136154 | ENSDARP00000122404 | Si:ch73-21k16.4. | Nucleolar protein with MIF4G domain 1. | 0.922 |
GPATCH2 | pinx1 | ENSDARP00000136154 | ENSDARP00000104805 | Si:ch73-21k16.4. | PIN2 (TERF1)-interacting telomerase inhibitor 1. | 0.935 |
bysl | GPATCH2 | ENSDARP00000001346 | ENSDARP00000136154 | Bystin-like. | Si:ch73-21k16.4. | 0.931 |
bysl | dhx15 | ENSDARP00000001346 | ENSDARP00000075688 | Bystin-like. | DEAH (Asp-Glu-Ala-His) box helicase 15. | 0.963 |
bysl | eif4a3 | ENSDARP00000001346 | ENSDARP00000135974 | Bystin-like. | Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...] | 0.521 |
bysl | fbl | ENSDARP00000001346 | ENSDARP00000070509 | Bystin-like. | Fibrillarin. | 0.999 |
bysl | lyar | ENSDARP00000001346 | ENSDARP00000140940 | Bystin-like. | Ly1 antibody reactive homolog (mouse). | 0.665 |
bysl | mak16 | ENSDARP00000001346 | ENSDARP00000098580 | Bystin-like. | Protein MAK16 homolog; Plays an essential role in early embryonic development. | 0.968 |
bysl | nom1 | ENSDARP00000001346 | ENSDARP00000122404 | Bystin-like. | Nucleolar protein with MIF4G domain 1. | 0.782 |
bysl | pinx1 | ENSDARP00000001346 | ENSDARP00000104805 | Bystin-like. | PIN2 (TERF1)-interacting telomerase inhibitor 1. | 0.959 |
bysl | snu13b | ENSDARP00000001346 | ENSDARP00000038446 | Bystin-like. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.899 |
bysl | wdr46 | ENSDARP00000001346 | ENSDARP00000122824 | Bystin-like. | WD repeat domain 46. | 0.999 |
dhx15 | GPATCH2 | ENSDARP00000075688 | ENSDARP00000136154 | DEAH (Asp-Glu-Ala-His) box helicase 15. | Si:ch73-21k16.4. | 0.991 |
dhx15 | bysl | ENSDARP00000075688 | ENSDARP00000001346 | DEAH (Asp-Glu-Ala-His) box helicase 15. | Bystin-like. | 0.963 |
dhx15 | eif4a3 | ENSDARP00000075688 | ENSDARP00000135974 | DEAH (Asp-Glu-Ala-His) box helicase 15. | Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...] | 0.761 |
dhx15 | fbl | ENSDARP00000075688 | ENSDARP00000070509 | DEAH (Asp-Glu-Ala-His) box helicase 15. | Fibrillarin. | 0.941 |
dhx15 | mak16 | ENSDARP00000075688 | ENSDARP00000098580 | DEAH (Asp-Glu-Ala-His) box helicase 15. | Protein MAK16 homolog; Plays an essential role in early embryonic development. | 0.651 |
dhx15 | nom1 | ENSDARP00000075688 | ENSDARP00000122404 | DEAH (Asp-Glu-Ala-His) box helicase 15. | Nucleolar protein with MIF4G domain 1. | 0.573 |
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