Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cog1 | cog4 | ENSDARP00000139736 | ENSDARP00000070899 | Component of oligomeric golgi complex 1. | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | 0.998 |
cog1 | golga2 | ENSDARP00000139736 | ENSDARP00000086520 | Component of oligomeric golgi complex 1. | Cis-Golgi matrix protein GM130. | 0.423 |
cog1 | rint1 | ENSDARP00000139736 | ENSDARP00000045638 | Component of oligomeric golgi complex 1. | RAD50 interactor 1. | 0.775 |
cog1 | scfd1 | ENSDARP00000139736 | ENSDARP00000121390 | Component of oligomeric golgi complex 1. | Sec1 family domain-containing 1; Belongs to the STXBP/unc-18/SEC1 family. | 0.602 |
cog1 | scfd2 | ENSDARP00000139736 | ENSDARP00000104899 | Component of oligomeric golgi complex 1. | Sec1 family domain-containing 2; Belongs to the STXBP/unc-18/SEC1 family. | 0.644 |
cog1 | zw10 | ENSDARP00000139736 | ENSDARP00000020574 | Component of oligomeric golgi complex 1. | Zw10 kinetochore protein. | 0.493 |
cog4 | cog1 | ENSDARP00000070899 | ENSDARP00000139736 | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | Component of oligomeric golgi complex 1. | 0.998 |
cog4 | nbas | ENSDARP00000070899 | ENSDARP00000047833 | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | Neuroblastoma-amplified sequence; Involved in Golgi-to-endoplasmic reticulum (ER) retrograde transport; the function is proposed to depend on its association in the NRZ complex which is believed to play a role in SNARE assembly at the ER (By similarity). | 0.529 |
cog4 | rint1 | ENSDARP00000070899 | ENSDARP00000045638 | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | RAD50 interactor 1. | 0.725 |
cog4 | scfd1 | ENSDARP00000070899 | ENSDARP00000121390 | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | Sec1 family domain-containing 1; Belongs to the STXBP/unc-18/SEC1 family. | 0.964 |
cog4 | scfd2 | ENSDARP00000070899 | ENSDARP00000104899 | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | Sec1 family domain-containing 2; Belongs to the STXBP/unc-18/SEC1 family. | 0.851 |
cog4 | stx18 | ENSDARP00000070899 | ENSDARP00000051892 | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | Syntaxin-18; Syntaxin that may be involved in targeting and fusion of Golgi-derived retrograde transport vesicles with the ER. Belongs to the syntaxin family. | 0.756 |
cog4 | zw10 | ENSDARP00000070899 | ENSDARP00000020574 | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. | Zw10 kinetochore protein. | 0.626 |
fip1l1a | lnx1 | ENSDARP00000118281 | ENSDARP00000118247 | FIP1-like 1a (S. cerevisiae). | Ligand of numb-protein X 1. | 0.667 |
fip1l1a | scfd2 | ENSDARP00000118281 | ENSDARP00000104899 | FIP1-like 1a (S. cerevisiae). | Sec1 family domain-containing 2; Belongs to the STXBP/unc-18/SEC1 family. | 0.860 |
golga2 | cog1 | ENSDARP00000086520 | ENSDARP00000139736 | Cis-Golgi matrix protein GM130. | Component of oligomeric golgi complex 1. | 0.423 |
golga2 | scfd1 | ENSDARP00000086520 | ENSDARP00000121390 | Cis-Golgi matrix protein GM130. | Sec1 family domain-containing 1; Belongs to the STXBP/unc-18/SEC1 family. | 0.585 |
golga2 | scfd2 | ENSDARP00000086520 | ENSDARP00000104899 | Cis-Golgi matrix protein GM130. | Sec1 family domain-containing 2; Belongs to the STXBP/unc-18/SEC1 family. | 0.744 |
lnx1 | fip1l1a | ENSDARP00000118247 | ENSDARP00000118281 | Ligand of numb-protein X 1. | FIP1-like 1a (S. cerevisiae). | 0.667 |
lnx1 | scfd2 | ENSDARP00000118247 | ENSDARP00000104899 | Ligand of numb-protein X 1. | Sec1 family domain-containing 2; Belongs to the STXBP/unc-18/SEC1 family. | 0.638 |
page 1 of 4