Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atoh7 | nr2e3 | ENSDARP00000092102 | ENSDARP00000111061 | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | Nuclear receptor subfamily 2, group E, member 3. | 0.586 |
| atoh7 | pax2a | ENSDARP00000092102 | ENSDARP00000071466 | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | Paired box protein Pax-2a; Probable transcription factor involved in the development of the midbrain/hindbrain boundary (MHB) organizer and specification of neuronal cell fates. Required for establishment of eng2 and eng3 gene expression in the midbrain and MHB primordium during late gastrulation. | 0.518 |
| atoh7 | rx2 | ENSDARP00000092102 | ENSDARP00000059002 | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | 0.593 |
| atoh7 | six3b | ENSDARP00000092102 | ENSDARP00000071625 | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | Sine oculis homeobox homolog 3b. | 0.812 |
| atoh7 | zpr1 | ENSDARP00000092102 | ENSDARP00000063922 | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | ZPR1 zinc finger. | 0.737 |
| crygm2d16 | rx2 | ENSDARP00000099283 | ENSDARP00000059002 | Crystallin, gamma M2d16; Belongs to the beta/gamma-crystallin family. | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | 0.540 |
| crygs3 | rx2 | ENSDARP00000046115 | ENSDARP00000059002 | Crystallin, gamma S3; Belongs to the beta/gamma-crystallin family. | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | 0.540 |
| myl7 | pax2a | ENSDARP00000040012 | ENSDARP00000071466 | Myosin, light polypeptide 7, regulatory. | Paired box protein Pax-2a; Probable transcription factor involved in the development of the midbrain/hindbrain boundary (MHB) organizer and specification of neuronal cell fates. Required for establishment of eng2 and eng3 gene expression in the midbrain and MHB primordium during late gastrulation. | 0.481 |
| myl7 | rx2 | ENSDARP00000040012 | ENSDARP00000059002 | Myosin, light polypeptide 7, regulatory. | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | 0.537 |
| nr2e3 | atoh7 | ENSDARP00000111061 | ENSDARP00000092102 | Nuclear receptor subfamily 2, group E, member 3. | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | 0.586 |
| nr2e3 | rx2 | ENSDARP00000111061 | ENSDARP00000059002 | Nuclear receptor subfamily 2, group E, member 3. | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | 0.598 |
| nr2e3 | six6b | ENSDARP00000111061 | ENSDARP00000110487 | Nuclear receptor subfamily 2, group E, member 3. | Sine oculis-related homeobox 6b. | 0.441 |
| nr2e3 | zpr1 | ENSDARP00000111061 | ENSDARP00000063922 | Nuclear receptor subfamily 2, group E, member 3. | ZPR1 zinc finger. | 0.489 |
| pax2a | atoh7 | ENSDARP00000071466 | ENSDARP00000092102 | Paired box protein Pax-2a; Probable transcription factor involved in the development of the midbrain/hindbrain boundary (MHB) organizer and specification of neuronal cell fates. Required for establishment of eng2 and eng3 gene expression in the midbrain and MHB primordium during late gastrulation. | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | 0.518 |
| pax2a | myl7 | ENSDARP00000071466 | ENSDARP00000040012 | Paired box protein Pax-2a; Probable transcription factor involved in the development of the midbrain/hindbrain boundary (MHB) organizer and specification of neuronal cell fates. Required for establishment of eng2 and eng3 gene expression in the midbrain and MHB primordium during late gastrulation. | Myosin, light polypeptide 7, regulatory. | 0.481 |
| pax2a | rx2 | ENSDARP00000071466 | ENSDARP00000059002 | Paired box protein Pax-2a; Probable transcription factor involved in the development of the midbrain/hindbrain boundary (MHB) organizer and specification of neuronal cell fates. Required for establishment of eng2 and eng3 gene expression in the midbrain and MHB primordium during late gastrulation. | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | 0.542 |
| pax2a | six3b | ENSDARP00000071466 | ENSDARP00000071625 | Paired box protein Pax-2a; Probable transcription factor involved in the development of the midbrain/hindbrain boundary (MHB) organizer and specification of neuronal cell fates. Required for establishment of eng2 and eng3 gene expression in the midbrain and MHB primordium during late gastrulation. | Sine oculis homeobox homolog 3b. | 0.777 |
| pvalb6 | rx2 | ENSDARP00000119857 | ENSDARP00000059002 | Parvalbumin isoform 4b; Belongs to the parvalbumin family. | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | 0.512 |
| rx2 | atoh7 | ENSDARP00000059002 | ENSDARP00000092102 | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | Protein atonal homolog 7; Transcription factor involved in the differentiation of retinal ganglion cells. | 0.593 |
| rx2 | crygm2d16 | ENSDARP00000059002 | ENSDARP00000099283 | Retinal homeobox protein Rx2; Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation; Belongs to the paired homeobox family. Bicoid subfamily. | Crystallin, gamma M2d16; Belongs to the beta/gamma-crystallin family. | 0.540 |
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