STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prrg1Proline-rich Gla (G-carboxyglutamic acid) 1. (214 aa)    
Predicted Functional Partners:
rffl
Ring finger and FYVE-like domain-containing E3 ubiquitin protein ligase.
      
 0.824
slc44a1a
Solute carrier family 44 member 1a; Belongs to the CTL (choline transporter-like) family.
      
 0.799
ap1s2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
      
 0.743
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
      
 0.743
smpx
Small muscle protein, X-linked.
   
  
 0.696
hccsb
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
      
 0.692
trappc2
Trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
      
 0.669
piga
Phosphatidylinositol glycan anchor biosynthesis, class A.
      
 0.667
phex
Phosphate-regulating endopeptidase homolog, X-linked.
      
 0.644
pdk3a
Protein-serine/threonine kinase.
      
 0.644
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.