STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc1Tetratricopeptide repeat domain 1 (330 aa)    
Predicted Functional Partners:
ttc4
Tetratricopeptide repeat domain 4
   
  
 0.785
ACP2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family
      
 0.710
zranb2
Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection
   
   0.703
LOC792697
Thyroid hormone receptor interactor 6
   
   0.701
ttll12
Tubulin tyrosine ligase-like family, member 12
   
   0.698
sssca1
Sjogren syndrome/scleroderma autoantigen 1
   
   0.684
ufm1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post-translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes
   
   0.681
srxn1
Sulfiredoxin 1 homolog (S. cerevisiae)
   
   0.681
TEX11
Testis expressed 11
      
 0.679
thg1l
tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage
   
  
 0.656
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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