Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C13H9orf72 | ttc1 | ENSDARP00000005597 | ENSDARP00000123828 | Zgc:100846. | Tetratricopeptide repeat domain 1. | 0.511 |
E7EZM5_DANRE | ttc1 | ENSDARP00000138492 | ENSDARP00000123828 | Si:dkey-274m17.3. | Tetratricopeptide repeat domain 1. | 0.485 |
hspa4a | hspa4b | ENSDARP00000026086 | ENSDARP00000020214 | Heat shock protein 4, like. | Heat shock protein 4b. | 0.903 |
hspa4a | tomm70a | ENSDARP00000026086 | ENSDARP00000117083 | Heat shock protein 4, like. | Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). | 0.644 |
hspa4a | ttc1 | ENSDARP00000026086 | ENSDARP00000123828 | Heat shock protein 4, like. | Tetratricopeptide repeat domain 1. | 0.515 |
hspa4b | hspa4a | ENSDARP00000020214 | ENSDARP00000026086 | Heat shock protein 4b. | Heat shock protein 4, like. | 0.903 |
hspa4b | tomm70a | ENSDARP00000020214 | ENSDARP00000117083 | Heat shock protein 4b. | Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). | 0.644 |
hspa4b | ttc1 | ENSDARP00000020214 | ENSDARP00000123828 | Heat shock protein 4b. | Tetratricopeptide repeat domain 1. | 0.521 |
nedd8 | ttc1 | ENSDARP00000021095 | ENSDARP00000123828 | NEDD8 ubiquitin-like modifier. | Tetratricopeptide repeat domain 1. | 0.483 |
ppp1r14c | ttc1 | ENSDARP00000099187 | ENSDARP00000123828 | Protein phosphatase 1, regulatory (inhibitor) subunit 14C. | Tetratricopeptide repeat domain 1. | 0.621 |
ppp1r7 | ttc1 | ENSDARP00000025441 | ENSDARP00000123828 | Protein phosphatase 1 regulatory subunit 7; Regulatory subunit of protein phosphatase 1; Belongs to the SDS22 family. | Tetratricopeptide repeat domain 1. | 0.644 |
rnf41 | tomm70a | ENSDARP00000053471 | ENSDARP00000117083 | E3 ubiquitin-protein ligase NRDP1; Acts as E3 ubiquitin-protein ligase and regulates the degradation of target proteins. | Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). | 0.573 |
rnf41 | ttc1 | ENSDARP00000053471 | ENSDARP00000123828 | E3 ubiquitin-protein ligase NRDP1; Acts as E3 ubiquitin-protein ligase and regulates the degradation of target proteins. | Tetratricopeptide repeat domain 1. | 0.543 |
tomm70a | hspa4a | ENSDARP00000117083 | ENSDARP00000026086 | Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). | Heat shock protein 4, like. | 0.644 |
tomm70a | hspa4b | ENSDARP00000117083 | ENSDARP00000020214 | Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). | Heat shock protein 4b. | 0.644 |
tomm70a | rnf41 | ENSDARP00000117083 | ENSDARP00000053471 | Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). | E3 ubiquitin-protein ligase NRDP1; Acts as E3 ubiquitin-protein ligase and regulates the degradation of target proteins. | 0.573 |
tomm70a | ttc1 | ENSDARP00000117083 | ENSDARP00000123828 | Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). | Tetratricopeptide repeat domain 1. | 0.577 |
top1mt-2 | ttc1 | ENSDARP00000139898 | ENSDARP00000123828 | DNA topoisomerase I mitochondrial. | Tetratricopeptide repeat domain 1. | 0.494 |
ttc1 | C13H9orf72 | ENSDARP00000123828 | ENSDARP00000005597 | Tetratricopeptide repeat domain 1. | Zgc:100846. | 0.511 |
ttc1 | E7EZM5_DANRE | ENSDARP00000123828 | ENSDARP00000138492 | Tetratricopeptide repeat domain 1. | Si:dkey-274m17.3. | 0.485 |
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