STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKHD1L1Si:ch211-244a23.1. (4198 aa)    
Predicted Functional Partners:
mamdc2b
MAM domain-containing 2b.
    
 
 0.810
ccdc73
Coiled-coil domain-containing 73.
      
 0.807
gpr75
G protein-coupled receptor 75.
      
 0.745
cdcp2
CUB domain-containing protein 2.
    
 
 0.729
klhl14
Kelch-like family member 14.
   
  
 0.706
rad51ap1
RAD51-associated protein 1.
      
 0.619
GPR151
G protein-coupled receptor 151.
      
 0.585
nktr
Natural killer cell triggering receptor.
      
 0.581
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.563
sult6b1
Sulfotransferase 6B1; Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of a variety of xenobiotic and endogenous compounds, including dopamine, T3 (triiodo-L-thyronine), T4 (thyroxine), flavonoids, isoflavonoids, and other phenolic compounds.
      
 0.556
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.