STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7F2E7_DANRESi:zfos-1192g2.3. (220 aa)    
Predicted Functional Partners:
rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.996
mrpl21
Mitochondrial ribosomal protein L21.
  
   0.990
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.989
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.988
mrpl15
39S ribosomal protein L15, mitochondrial; Belongs to the universal ribosomal protein uL15 family.
    
   0.988
mrpl47
Mitochondrial ribosomal protein L47.
   
   0.985
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.984
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.972
mtg1
Mitochondrial ribosome-associated GTPase 1.
  
 
 0.969
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.968
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.