STRINGSTRING
gpc1a protein (Danio rerio) - STRING interaction network
"gpc1a" - Glypican-1 in Danio rerio
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
gpc1aGlypican-1; Cell surface proteoglycan that bears heparan sulfate; Belongs to the glypican family (563 aa)    
Predicted Functional Partners:
hspg2
Heparan sulfate proteoglycan 2 (3422 aa)
     
 
  0.953
sdc2
Syndecan; Cell surface proteoglycan (208 aa)
     
 
  0.950
sdc3
Syndecan; Cell surface proteoglycan (402 aa)
     
 
  0.948
sdc4
Syndecan 4 (207 aa)
     
 
  0.945
b3galt6
Hexosyltransferase; UDP-Gal-betaGal beta 1,3-galactosyltransferase polypeptide 6 (335 aa)
     
 
  0.944
b3gat1a
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) a; Belongs to the glycosyltransferase 43 family (334 aa)
     
 
  0.944
ndst3
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 (874 aa)
       
  0.943
ndst2
Uncharacterized protein (894 aa)
       
  0.943
xylt2
annotation not available (341 aa)
       
  0.940
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I); Belongs to the glycosyltransferase 43 family (368 aa)
     
 
  0.938
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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