STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rasal3RAS protein activator-like 3. (1124 aa)    
Predicted Functional Partners:
arhgef3l
Rho guanine nucleotide exchange factor (GEF) 3,-like.
   
  
 0.852
F6P152_DANRE
Si:ch211-236k19.2.
   
  
 0.809
arhgef18b
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
    
 
 0.803
rab14l
RAB14, member RAS oncogene family,-like.
    
 
 0.775
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.668
F1R9B8_DANRE
Si:ch211-241e1.3.
   
 
 0.634
rasa4
RAS p21 protein activator 4.
    
0.627
fbxw2
F-box and WD repeat domain-containing 2.
    
 
 0.615
arglu1a
Arginine and glutamate-rich protein 1-A; Belongs to the UPF0430 family.
    
 
 0.614
hrasb
-Ha-ras Harvey rat sarcoma viral oncogene homolog, like.
    
 0.594
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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