Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC110440168 | ewsr1b | ENSDARP00000057247 | ENSDARP00000002269 | EWS RNA-binding protein 1b. | Ewing sarcoma breakpoint region 1b. | 0.432 |
LOC110440168 | rbm14a | ENSDARP00000057247 | ENSDARP00000005830 | EWS RNA-binding protein 1b. | RNA-binding motif protein 14a. | 0.729 |
LOC110440168 | srsf2a | ENSDARP00000057247 | ENSDARP00000074623 | EWS RNA-binding protein 1b. | Serine and arginine-rich-splicing factor 2a. | 0.457 |
LOC110440168 | tmem50a | ENSDARP00000057247 | ENSDARP00000120219 | EWS RNA-binding protein 1b. | Transmembrane protein 50A. | 0.557 |
cirbpb | pabpn1l | ENSDARP00000096178 | ENSDARP00000118258 | Cold-inducible RNA-binding protein b. | PABPN1-like, cytoplasmic. | 0.558 |
cirbpb | rbfox1l | ENSDARP00000096178 | ENSDARP00000016637 | Cold-inducible RNA-binding protein b. | RNA binding protein fox-1 homolog 1-like; RNA-binding protein that regulates alternative splicing events by binding to 5'-GCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. | 0.540 |
cirbpb | rbm14a | ENSDARP00000096178 | ENSDARP00000005830 | Cold-inducible RNA-binding protein b. | RNA-binding motif protein 14a. | 0.506 |
cirbpb | srsf2a | ENSDARP00000096178 | ENSDARP00000074623 | Cold-inducible RNA-binding protein b. | Serine and arginine-rich-splicing factor 2a. | 0.492 |
cirbpb | srsf2b | ENSDARP00000096178 | ENSDARP00000131299 | Cold-inducible RNA-binding protein b. | Serine and arginine-rich-splicing factor 2b. | 0.410 |
ctrl | rbm14a | ENSDARP00000090198 | ENSDARP00000005830 | Chymotrypsin-like; Belongs to the peptidase S1 family. | RNA-binding motif protein 14a. | 0.491 |
ewsr1b | LOC110440168 | ENSDARP00000002269 | ENSDARP00000057247 | Ewing sarcoma breakpoint region 1b. | EWS RNA-binding protein 1b. | 0.432 |
ewsr1b | rbm14a | ENSDARP00000002269 | ENSDARP00000005830 | Ewing sarcoma breakpoint region 1b. | RNA-binding motif protein 14a. | 0.641 |
ewsr1b | srsf2a | ENSDARP00000002269 | ENSDARP00000074623 | Ewing sarcoma breakpoint region 1b. | Serine and arginine-rich-splicing factor 2a. | 0.425 |
ewsr1b | tmem50a | ENSDARP00000002269 | ENSDARP00000120219 | Ewing sarcoma breakpoint region 1b. | Transmembrane protein 50A. | 0.477 |
pabpn1l | cirbpb | ENSDARP00000118258 | ENSDARP00000096178 | PABPN1-like, cytoplasmic. | Cold-inducible RNA-binding protein b. | 0.558 |
pabpn1l | rbm14a | ENSDARP00000118258 | ENSDARP00000005830 | PABPN1-like, cytoplasmic. | RNA-binding motif protein 14a. | 0.477 |
pabpn1l | rbm38 | ENSDARP00000118258 | ENSDARP00000076202 | PABPN1-like, cytoplasmic. | RNA-binding motif protein 38. | 0.420 |
rbfox1l | cirbpb | ENSDARP00000016637 | ENSDARP00000096178 | RNA binding protein fox-1 homolog 1-like; RNA-binding protein that regulates alternative splicing events by binding to 5'-GCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. | Cold-inducible RNA-binding protein b. | 0.540 |
rbfox1l | rbm14a | ENSDARP00000016637 | ENSDARP00000005830 | RNA binding protein fox-1 homolog 1-like; RNA-binding protein that regulates alternative splicing events by binding to 5'-GCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. | RNA-binding motif protein 14a. | 0.488 |
rbfox1l | rbm38 | ENSDARP00000016637 | ENSDARP00000076202 | RNA binding protein fox-1 homolog 1-like; RNA-binding protein that regulates alternative splicing events by binding to 5'-GCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. | RNA-binding motif protein 38. | 0.586 |
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