STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nipsnap2Protein NipSnap homolog 2. (284 aa)    
Predicted Functional Partners:
tax1bp1b
Tax1-binding protein 1 homolog B; May have anti-apoptotic activity.
   
  
 0.812
fkbp8
Peptidylprolyl isomerase.
   
 
 0.725
mthfsd
Methenyltetrahydrofolate synthase domain-containing protein.
   
    0.718
tax1bp1a
Tax1-binding protein 1 homolog A; May have anti-apoptotic activity.
   
  
 0.697
smim12
Small integral membrane protein 12.
   
  
 0.694
snap25a
Synaptosomal-associated protein 25-A; May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion; Belongs to the SNAP-25 family.
   
  
 0.681
sumf2
Sulfatase-modifying factor 2.
    
 
 0.680
bcl2l13
Bcl2l13 protein.
      
 0.650
mxra7
Matrix-remodelling-associated 7.
      
 0.649
fundc1
FUN14 domain-containing protein 1; Acts as an activator of hypoxia-induced mitophagy, an important mechanism for mitochondrial quality control; Belongs to the FUN14 family.
      
 0.646
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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