STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osbpl6Oxysterol-binding protein; Belongs to the OSBP family. (910 aa)    
Predicted Functional Partners:
ccdc126
Coiled-coil domain-containing 126.
      
 0.862
asb16
Ankyrin repeat and SOCS box-containing 16.
    
 
 0.836
lrrc20
Leucine-rich repeat-containing 20.
      
 0.833
lrrc14b
Leucine-rich repeat-containing protein 14B; Belongs to the PRAME family. LRRC14 subfamily.
      
 0.832
asb12a
Ankyrin repeat and SOCS box-containing 12a.
    
 
 0.807
lrrc30a
Leucine-rich repeat-containing 30a.
      
 0.807
lrrc38a
Leucine-rich repeat-containing 38a.
      
 0.807
asb5b
Ankyrin repeat and SOCS box-containing 5b.
    
 
 0.751
rarres3
Retinoic acid receptor responder 3.
   
  
 0.746
tmem38a
Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores.
      
 0.742
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.