Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arl6ip1 | atl1 | ENSDARP00000058954 | ENSDARP00000101056 | ADP-ribosylation factor-like 6-interacting protein 1. | Atlastin GTPase 1. | 0.823 |
arl6ip1 | ist1 | ENSDARP00000058954 | ENSDARP00000068086 | ADP-ribosylation factor-like 6-interacting protein 1. | IST1 factor-associated with ESCRT-III. | 0.442 |
arl6ip1 | reep1 | ENSDARP00000058954 | ENSDARP00000023771 | ADP-ribosylation factor-like 6-interacting protein 1. | Receptor expression-enhancing protein. | 0.830 |
arl6ip1 | spast | ENSDARP00000058954 | ENSDARP00000029675 | ADP-ribosylation factor-like 6-interacting protein 1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | 0.739 |
arl6ip1 | zfyve27 | ENSDARP00000058954 | ENSDARP00000113701 | ADP-ribosylation factor-like 6-interacting protein 1. | Zinc finger, FYVE domain-containing 27. | 0.730 |
atl1 | arl6ip1 | ENSDARP00000101056 | ENSDARP00000058954 | Atlastin GTPase 1. | ADP-ribosylation factor-like 6-interacting protein 1. | 0.823 |
atl1 | ist1 | ENSDARP00000101056 | ENSDARP00000068086 | Atlastin GTPase 1. | IST1 factor-associated with ESCRT-III. | 0.625 |
atl1 | pdzd8 | ENSDARP00000101056 | ENSDARP00000108510 | Atlastin GTPase 1. | PDZ domain-containing 8. | 0.424 |
atl1 | reep1 | ENSDARP00000101056 | ENSDARP00000023771 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.976 |
atl1 | spast | ENSDARP00000101056 | ENSDARP00000029675 | Atlastin GTPase 1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | 0.981 |
atl1 | top1mt-2 | ENSDARP00000101056 | ENSDARP00000139898 | Atlastin GTPase 1. | DNA topoisomerase I mitochondrial. | 0.483 |
atl1 | washc5 | ENSDARP00000101056 | ENSDARP00000131386 | Atlastin GTPase 1. | WASH complex subunit 5; Acts at least in part as component of the WASH complex which seems to regulate washc1 nucleation-promoting factor (NPF) activity and is required for its membrane targeting during endosomal sorting. Belongs to the strumpellin family. | 0.806 |
atl1 | zfyve27 | ENSDARP00000101056 | ENSDARP00000113701 | Atlastin GTPase 1. | Zinc finger, FYVE domain-containing 27. | 0.839 |
ist1 | arl6ip1 | ENSDARP00000068086 | ENSDARP00000058954 | IST1 factor-associated with ESCRT-III. | ADP-ribosylation factor-like 6-interacting protein 1. | 0.442 |
ist1 | atl1 | ENSDARP00000068086 | ENSDARP00000101056 | IST1 factor-associated with ESCRT-III. | Atlastin GTPase 1. | 0.625 |
ist1 | reep1 | ENSDARP00000068086 | ENSDARP00000023771 | IST1 factor-associated with ESCRT-III. | Receptor expression-enhancing protein. | 0.688 |
ist1 | spast | ENSDARP00000068086 | ENSDARP00000029675 | IST1 factor-associated with ESCRT-III. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | 0.986 |
ist1 | top1mt-2 | ENSDARP00000068086 | ENSDARP00000139898 | IST1 factor-associated with ESCRT-III. | DNA topoisomerase I mitochondrial. | 0.434 |
ist1 | washc5 | ENSDARP00000068086 | ENSDARP00000131386 | IST1 factor-associated with ESCRT-III. | WASH complex subunit 5; Acts at least in part as component of the WASH complex which seems to regulate washc1 nucleation-promoting factor (NPF) activity and is required for its membrane targeting during endosomal sorting. Belongs to the strumpellin family. | 0.742 |
ist1 | zfyve27 | ENSDARP00000068086 | ENSDARP00000113701 | IST1 factor-associated with ESCRT-III. | Zinc finger, FYVE domain-containing 27. | 0.728 |
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