STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chst1Carbohydrate sulfotransferase 1; Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the transfer of sulfate to position 6 of galactose (Gal) residues of keratan. (420 aa)    
Predicted Functional Partners:
Q1LWC9_DANRE
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
  
 
0.901
chst12a
Carbohydrate sulfotransferase.
      
 0.469
lum
Lumican.
   
 
 0.446
prelp
Proline/arginine-rich end leucine-rich repeat protein.
     
 0.443
tmtc1
Transmembrane O-mannosyltransferase targeting cadherins 1.
      
 0.435
fmoda
Fibromodulin a.
   
 
 0.414
kera
Keratocan; May be important in developing and maintaining corneal transparency and for the structure of the stromal matrix. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class II subfamily.
   
 
 0.411
bbs10
Bardet-Biedl syndrome 10.
      
 0.408
chst14
Carbohydrate sulfotransferase 14; Catalyzes the transfer of sulfate to position 4 of the N- acetylgalactosamine (GalNAc) residue of dermatan sulfate. Belongs to the sulfotransferase 2 family.
      
 0.406
ogna
Osteoglycin, paralog a.
   
 
  0.402
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.