STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celf2CUGBP Elav-like family member 2; RNA-binding protein implicated in the regulation of several post-transcriptional events. May be involved in pre-mRNA alternative splicing, mRNA translation repression and stability (By similarity). (493 aa)    
Predicted Functional Partners:
mbnl1
Muscleblind-like-splicing regulator 1.
   
 
 0.788
rbfox1
RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUGU-3' elements. Regulates alternative splicing of tissue-specific exons (By similarity).
   
 
 0.767
mbnl3
Muscleblind-like-splicing regulator 3.
   
 
 0.726
hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
   
 
 0.667
ssx2ipb
Synovial sarcoma, X breakpoint 2-interacting protein b.
   
 
 0.639
rbfox2
RNA-binding fox-1 homolog 2.
   
 
 0.612
rbfox1l
RNA binding protein fox-1 homolog 1-like; RNA-binding protein that regulates alternative splicing events by binding to 5'-GCAUG-3' elements. Regulates alternative splicing of tissue-specific exons.
    
 
 0.609
mbnl2
Muscleblind-like-splicing regulator 2.
   
 
 0.593
styxl1
Serine/threonine/tyrosine-interacting-like 1.
   
  
 0.589
zgc:55733
Zgc:55733.
   
 
 0.587
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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