STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttyh3bProtein tweety homolog 3; Probable large-conductance Ca(2+)-activated chloride channel. Belongs to the tweety family. (560 aa)    
Predicted Functional Partners:
E7FFH7_DANRE
Si:ch211-106h11.1.
      
 0.770
lrrc8da
Leucine-rich repeat-containing 8 VRAC subunit Da.
      
 0.770
lrrc8ab
Leucine-rich repeat-containing 8 VRAC subunit Ab.
      
 0.747
E7FB32_DANRE
Si:zfos-323e3.4.
      
 0.744
lrrc8c
Leucine-rich repeat-containing 8 VRAC subunit C.
      
 0.742
lrrc8db
Leucine rich repeat containing 8 family, member D.
      
 0.727
lrrc8aa
Leucine-rich repeat-containing 8 VRAC subunit Aa.
      
 0.675
mansc1
MANSC domain-containing 1.
    
 
 0.577
ano6
Anoctamin.
      
 0.558
best1
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
      
 0.519
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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