Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ep300b | foxa1 | ENSDARP00000129212 | ENSDARP00000137654 | E1A-binding protein p300 b. | Forkhead box A1. | 0.824 |
ep300b | gata3 | ENSDARP00000129212 | ENSDARP00000017572 | E1A-binding protein p300 b. | Transcription factor GATA-3. | 0.849 |
ep300b | hdac1 | ENSDARP00000129212 | ENSDARP00000051798 | E1A-binding protein p300 b. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.738 |
ep300b | lef1 | ENSDARP00000129212 | ENSDARP00000114249 | E1A-binding protein p300 b. | Lymphocyte enhancer binding factor 1 Lef1. | 0.935 |
ep300b | nrip1a | ENSDARP00000129212 | ENSDARP00000114091 | E1A-binding protein p300 b. | Nuclear receptor-interacting protein 1a. | 0.890 |
ep300b | tcf7 | ENSDARP00000129212 | ENSDARP00000128252 | E1A-binding protein p300 b. | Transcription factor 7. | 0.918 |
ep300b | tcf7l1a | ENSDARP00000129212 | ENSDARP00000090035 | E1A-binding protein p300 b. | Transcription factor 7-like 1-A; Participates in the Wnt signaling pathway. Probably binds to DNA and acts as a repressor in the absence of ctnnb1, and possibly as an activator in its presence. Required early in development for dorsal specific gene activation and during gastrulation for repression of dorsal-specific genes in the marginal zone. Required for head formation and forebrain specification. Regulates anterior-posterior patterning in the neuroectoderm by repressing posterior neural fates. Belongs to the TCF/LEF family. | 0.922 |
ep300b | tcf7l2 | ENSDARP00000129212 | ENSDARP00000009531 | E1A-binding protein p300 b. | Transcription factor 7-like 2 (T-cell specific, HMG-box). | 0.923 |
ep300b | tle3b | ENSDARP00000129212 | ENSDARP00000143498 | E1A-binding protein p300 b. | Transducin-like enhancer protein 3-B; Transcriptional corepressor that binds to a number of transcription factors; Belongs to the WD repeat Groucho/TLE family. | 0.818 |
foxa1 | ep300b | ENSDARP00000137654 | ENSDARP00000129212 | Forkhead box A1. | E1A-binding protein p300 b. | 0.824 |
foxa1 | gata3 | ENSDARP00000137654 | ENSDARP00000017572 | Forkhead box A1. | Transcription factor GATA-3. | 0.965 |
foxa1 | hdac1 | ENSDARP00000137654 | ENSDARP00000051798 | Forkhead box A1. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.591 |
foxa1 | nkx2.2a | ENSDARP00000137654 | ENSDARP00000153588 | Forkhead box A1. | Homeobox protein Nkx-2.2a; Transcriptional activator involved in the development of insulin-producting beta cells in the endocrine pancreas (By similarity). May also be involved in specifying diencephalic neuromeric boundaries, and in controlling the expression of genes that play a role in axonal guidance. Binds to elements within the NEUROD1 promoter (By similarity). | 0.626 |
foxa1 | nrip1a | ENSDARP00000137654 | ENSDARP00000114091 | Forkhead box A1. | Nuclear receptor-interacting protein 1a. | 0.814 |
foxa1 | tle3b | ENSDARP00000137654 | ENSDARP00000143498 | Forkhead box A1. | Transducin-like enhancer protein 3-B; Transcriptional corepressor that binds to a number of transcription factors; Belongs to the WD repeat Groucho/TLE family. | 0.857 |
gata3 | ep300b | ENSDARP00000017572 | ENSDARP00000129212 | Transcription factor GATA-3. | E1A-binding protein p300 b. | 0.849 |
gata3 | foxa1 | ENSDARP00000017572 | ENSDARP00000137654 | Transcription factor GATA-3. | Forkhead box A1. | 0.965 |
gata3 | hdac1 | ENSDARP00000017572 | ENSDARP00000051798 | Transcription factor GATA-3. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.720 |
gata3 | nkx2.2a | ENSDARP00000017572 | ENSDARP00000153588 | Transcription factor GATA-3. | Homeobox protein Nkx-2.2a; Transcriptional activator involved in the development of insulin-producting beta cells in the endocrine pancreas (By similarity). May also be involved in specifying diencephalic neuromeric boundaries, and in controlling the expression of genes that play a role in axonal guidance. Binds to elements within the NEUROD1 promoter (By similarity). | 0.476 |
gata3 | nrip1a | ENSDARP00000017572 | ENSDARP00000114091 | Transcription factor GATA-3. | Nuclear receptor-interacting protein 1a. | 0.809 |
page 1 of 4