STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cul5bCullin 5b; Belongs to the cullin family. (795 aa)    
Predicted Functional Partners:
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 
 0.971
eloca
Elongin C paralog a; Belongs to the SKP1 family.
    
 
 0.950
elocb
Elongin C paralog b; Belongs to the SKP1 family.
    
 
 0.950
rnf7
Ring finger protein 7.
    
 0.949
arih2
RBR-type E3 ubiquitin transferase.
    
 
 0.933
cbfb
Core-binding factor subunit beta.
    
 
 0.910
socs2
Suppressor of cytokine signaling 2.
   
 
 0.903
cul5a
Cullin 5a; Belongs to the cullin family.
  
  
0.900
nedd8
NEDD8 ubiquitin-like modifier.
    
 
 0.867
nedd8l
NEDD8 ubiquitin-like modifier, like.
    
 
 0.867
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.