Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
agmat | arg1 | ENSDARP00000135941 | ENSDARP00000097045 | Agmatine ureohydrolase (agmatinase); Belongs to the arginase family. | Arginase. | 0.514 |
agmat | arg2 | ENSDARP00000135941 | ENSDARP00000057376 | Agmatine ureohydrolase (agmatinase); Belongs to the arginase family. | Arginase. | 0.536 |
agmat | isoc1 | ENSDARP00000135941 | ENSDARP00000078713 | Agmatine ureohydrolase (agmatinase); Belongs to the arginase family. | Isochorismatase domain-containing protein 1; Belongs to the isochorismatase family. | 0.660 |
agmat | nit2 | ENSDARP00000135941 | ENSDARP00000121828 | Agmatine ureohydrolase (agmatinase); Belongs to the arginase family. | Omega-amidase NIT2; Has a omega-amidase activity. The role of omega-amidase is to remove potentially toxic intermediates by converting alpha- ketoglutaramate and alpha-ketosuccinamate to biologically useful alpha- ketoglutarate and oxaloacetate, respectively. | 0.409 |
arg1 | agmat | ENSDARP00000097045 | ENSDARP00000135941 | Arginase. | Agmatine ureohydrolase (agmatinase); Belongs to the arginase family. | 0.514 |
arg1 | arg2 | ENSDARP00000097045 | ENSDARP00000057376 | Arginase. | Arginase. | 0.906 |
arg1 | isoc1 | ENSDARP00000097045 | ENSDARP00000078713 | Arginase. | Isochorismatase domain-containing protein 1; Belongs to the isochorismatase family. | 0.663 |
arg1 | nit2 | ENSDARP00000097045 | ENSDARP00000121828 | Arginase. | Omega-amidase NIT2; Has a omega-amidase activity. The role of omega-amidase is to remove potentially toxic intermediates by converting alpha- ketoglutaramate and alpha-ketosuccinamate to biologically useful alpha- ketoglutarate and oxaloacetate, respectively. | 0.418 |
arg2 | agmat | ENSDARP00000057376 | ENSDARP00000135941 | Arginase. | Agmatine ureohydrolase (agmatinase); Belongs to the arginase family. | 0.536 |
arg2 | arg1 | ENSDARP00000057376 | ENSDARP00000097045 | Arginase. | Arginase. | 0.906 |
arg2 | isoc1 | ENSDARP00000057376 | ENSDARP00000078713 | Arginase. | Isochorismatase domain-containing protein 1; Belongs to the isochorismatase family. | 0.663 |
arg2 | nit2 | ENSDARP00000057376 | ENSDARP00000121828 | Arginase. | Omega-amidase NIT2; Has a omega-amidase activity. The role of omega-amidase is to remove potentially toxic intermediates by converting alpha- ketoglutaramate and alpha-ketosuccinamate to biologically useful alpha- ketoglutarate and oxaloacetate, respectively. | 0.418 |
ephx2 | isoc1 | ENSDARP00000058889 | ENSDARP00000078713 | Epoxide hydrolase 2, cytoplasmic. | Isochorismatase domain-containing protein 1; Belongs to the isochorismatase family. | 0.616 |
ephx2 | nadsyn1 | ENSDARP00000058889 | ENSDARP00000137823 | Epoxide hydrolase 2, cytoplasmic. | Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. | 0.566 |
ephx2 | naprt | ENSDARP00000058889 | ENSDARP00000035128 | Epoxide hydrolase 2, cytoplasmic. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Helps prevent cellular oxidative stress via its role in NAD biosynthesis; Belongs to the NAPRTase family. | 0.408 |
ephx2 | nit2 | ENSDARP00000058889 | ENSDARP00000121828 | Epoxide hydrolase 2, cytoplasmic. | Omega-amidase NIT2; Has a omega-amidase activity. The role of omega-amidase is to remove potentially toxic intermediates by converting alpha- ketoglutaramate and alpha-ketosuccinamate to biologically useful alpha- ketoglutarate and oxaloacetate, respectively. | 0.426 |
es1 | isoc1 | ENSDARP00000112917 | ENSDARP00000078713 | ES1 protein, mitochondrial; Plays a role in promoting mitochondrial enlargement in cone photoreceptor cells in a fusion-independent and ATP-dependent manner. | Isochorismatase domain-containing protein 1; Belongs to the isochorismatase family. | 0.839 |
es1 | nit2 | ENSDARP00000112917 | ENSDARP00000121828 | ES1 protein, mitochondrial; Plays a role in promoting mitochondrial enlargement in cone photoreceptor cells in a fusion-independent and ATP-dependent manner. | Omega-amidase NIT2; Has a omega-amidase activity. The role of omega-amidase is to remove potentially toxic intermediates by converting alpha- ketoglutaramate and alpha-ketosuccinamate to biologically useful alpha- ketoglutarate and oxaloacetate, respectively. | 0.703 |
isoc1 | agmat | ENSDARP00000078713 | ENSDARP00000135941 | Isochorismatase domain-containing protein 1; Belongs to the isochorismatase family. | Agmatine ureohydrolase (agmatinase); Belongs to the arginase family. | 0.660 |
isoc1 | arg1 | ENSDARP00000078713 | ENSDARP00000097045 | Isochorismatase domain-containing protein 1; Belongs to the isochorismatase family. | Arginase. | 0.663 |
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