STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc5a6bSolute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (602 aa)    
Predicted Functional Partners:
slc37a1
Solute carrier family 37 member 1.
   
 
 0.854
slc16a5a
Solute carrier family 16 member 5a.
      
 0.699
mccc1
Methylcrotonoyl-CoA carboxylase 1 (alpha).
   
  
 0.619
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.611
pcca
Propionyl-CoA carboxylase subunit alpha.
   
  
 0.589
laptm4b
Lysosomal associated protein transmembrane 4 beta.
      
 0.586
slc16a9b
Solute carrier family 16 member 9b.
      
 0.583
mccc2
Methylcrotonoyl-CoA carboxylase 2 (beta).
      
 0.579
slc19a3b
Solute carrier family 19 member 3b.
    
 
 0.551
dpep1
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
   
  
 0.544
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.