STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grip2bGlutamate receptor-interacting protein 2b. (1119 aa)    
Predicted Functional Partners:
lrp1bb
Low density lipoprotein receptor-related protein 1Bb.
      
 0.801
pick1
Protein-interacting with prkca 1.
   
 0.793
igsf21a
Immunoglobin superfamily, member 21a.
   
 
 0.766
LOC100149482
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 
 0.742
gria4b
Glutamate receptor, ionotropic, AMPA 4b.
   
 
 0.735
gria1a
Glutamate receptor, ionotropic, AMPA 1a.
   
 0.732
gria3b
Glutamate receptor, ionotropic, AMPA 3b.
   
 0.713
gria2b
Glutamate receptor, ionotropic, AMPA 2b.
    
 0.703
grin2ca
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
    
 
 0.670
rbms3
RNA-binding motif, single stranded-interacting protein.
      
 0.648
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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