STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pebp1Phosphatidylethanolamine-binding protein 1. (187 aa)    
Predicted Functional Partners:
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.880
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.871
dap3
Death-associated protein 3.
   
 
 0.870
mrps10
Probable 28S ribosomal protein S10, mitochondrial; Belongs to the universal ribosomal protein uS10 family.
   
 
 0.869
mrpl16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.867
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.863
mrps2
Mitochondrial ribosomal protein S2.
   
 
 0.860
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.858
mrpl44
Mitochondrial ribosomal protein L44.
   
 
 0.857
mrpl4
39S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL4 family.
   
 
 0.856
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.