STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr146G protein-coupled receptor 146 (333 aa)    
Predicted Functional Partners:
GPR139
G protein-coupled receptor 139
      
 0.949
ENSDARG00000087601
G protein-coupled receptor 153
      
 0.936
ENSDARG00000059988
G protein-coupled receptor 153
      
 0.936
GPR83
Si:dkey-27p18.2; G protein-coupled receptor 83; Belongs to the G-protein coupled receptor 1 family
      
 0.847
LOC570873
Kelch-like family member 35
      
 0.817
psmg3
Proteasome (prosome, macropain) assembly chaperone 3
      
 0.802
ENSDARG00000075268
Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins
      
 0.793
COX19
Cytochrome c oxidase assembly homolog 19 (S. cerevisiae)
      
 0.786
rfxap
Regulatory factor X-associated protein
      
 0.688
degs2
Delta(4)-desaturase, sphingolipid 2; Degenerative spermatocyte homolog 2, lipid desaturase (Drosophila)
      
 0.676
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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