STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lppLIM domain-containing preferred translocation partner in lipoma. (556 aa)    
Predicted Functional Partners:
gbe1b
Glucan (1,4-alpha-),-branching enzyme 1b.
      
 0.626
atp10a
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.587
haus3
Augmin-like complex subunit 3-like protein beta.
   
 
 0.571
slco2a1
Solute carrier organic anion transporter family member.
   
  
 0.570
scly
Selenocysteine lyase.
      
 0.567
Cabin1
Si:ch73-313l22.2.
      
 0.561
cabin1
Calcineurin-binding protein 1.
      
 0.558
haus1
HAUS augmin-like complex, subunit 1.
   
 
 0.552
gbe1a
Glucan (1,4-alpha-),-branching enzyme 1a.
      
 0.542
plpp3
Phospholipid phosphatase 3.
   
  
 0.539
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.