STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcg2dATP-binding cassette transporter sub-family G member 2d. (613 aa)    
Predicted Functional Partners:
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
 
0.617
abcc6a
ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.
   
 
 0.577
tlcd4a
TLC domain-containing 4a.
      
 0.568
abcc12
ATP-binding cassette, sub-family C (CFTR/MRP), member 12.
   
 
 0.541
abcd4
ATP-binding cassette, sub-family D (ALD), member 4.
   
  
 0.508
atp5fa1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.498
abcc5
ATP-binding cassette, sub-family C (CFTR/MRP), member 5.
   
 
 0.497
atp5f1c
ATP synthase subunit gamma.
   
   0.492
atp5f1d
ATP synthase F1 subunit delta.
   
   0.481
abcc2
ATP-binding cassette, sub-family C (CFTR/MRP), member 2.
   
 
0.469
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.