STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgals1l1Galectin. (134 aa)    
Predicted Functional Partners:
tmem176l.4
Transmembrane protein 176l.4.
   
  
 0.696
cbln11
Cerebellin 11.
    
 
 0.693
yrdc
YrdC N(6)-threonylcarbamoyltransferase domain-containing.
      
 0.691
X1WG46_DANRE
Si:dkey-239b22.1.
      
 0.691
ENSDARP00000131071
Si:dkey-247k7.2.
      
 0.691
ENSDARP00000142441
Si:ch211-183d5.2.
      
 0.691
krt96
Keratin 96; Belongs to the intermediate filament family.
      
 0.669
F1QWR2_DANRE
Si:ch211-153b23.4.
      
 0.667
ENSDARP00000142832
Si:ch211-15b10.6.
      
 0.644
F1QEW2_DANRE
Si:dkey-183i3.5; Belongs to the intermediate filament family.
   
  
 0.640
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.